Update: Instead of setting skiptoend to 0 “before experiment” and setting it to 1 and the end of a particular routine, I also re-set it to 0 at the end of that routine. Weirdly that fixed it.
Update: Instead of setting skiptoend to 0 “before experiment” and setting it to 1 and the end of a particular routine, I also re-set it to 0 at the end of that routine. Weirdly that fixed it.